org.ngbw.web.actions
Class SequenceAlignmentDispatcher

java.lang.Object
  javax.servlet.GenericServlet
      javax.servlet.http.HttpServlet
          org.ngbw.web.actions.SequenceAlignmentDispatcher

All Implemented Interfaces:

java.io.Serializable, javax.servlet.Servlet, javax.servlet.ServletConfig

public class SequenceAlignmentDispatcher
extends javax.servlet.http.HttpServlet

This servlet resides on the server and accepts requests for sequence alignments. It reads the input as a fasta-formatted String, and sends back a String that contains clustalw output.

Author:

Sasha Buzko

See Also:

Serialized Form

Constructor Summary

SequenceAlignmentDispatcher()

Method Summary

void	doGet(javax.servlet.http.HttpServletRequest req, javax.servlet.http.HttpServletResponse res)
void	doPost(javax.servlet.http.HttpServletRequest req, javax.servlet.http.HttpServletResponse res)

Methods inherited from class javax.servlet.http.HttpServlet

service

Methods inherited from class javax.servlet.GenericServlet

destroy, getInitParameter, getInitParameterNames, getServletConfig, getServletContext, getServletInfo, getServletName, init, init, log, log

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SequenceAlignmentDispatcher

public SequenceAlignmentDispatcher()

Method Detail

doPost

public void doPost(javax.servlet.http.HttpServletRequest req,
                   javax.servlet.http.HttpServletResponse res)
            throws javax.servlet.ServletException,
                   java.io.IOException

Overrides:

doPost in class javax.servlet.http.HttpServlet

Throws:

javax.servlet.ServletException

java.io.IOException

doGet

public void doGet(javax.servlet.http.HttpServletRequest req,
                  javax.servlet.http.HttpServletResponse res)
           throws javax.servlet.ServletException,
                  java.io.IOException,
                  java.io.OptionalDataException

Overrides:

doGet in class javax.servlet.http.HttpServlet

Throws:

javax.servlet.ServletException

java.io.IOException

java.io.OptionalDataException