Package edu.sdsc.mbt

Interface Summary
StructureComponentEventListener Properties, data, or the organizational structure of data changed.
 

Class Summary
AnnotationComponent  
AnnotationComponentRegistry  
ArrowComponent  
Atom Implements a StructureComponent container for atom data.
Bond Implements a StructureComponent container for bond information.
Chain Implements a StructureComponent container for chain information.
Coil Implements a StructureComponent container for Coil conformation (secondary structure) data.
Conformation Implements a an abstract StructureComponent container for conformation (secondary structure) data.
Fragment Implements a StructureComponent container for secondary structure fragment information.
Helix Implements a StructureComponent container for Helix conformation (secondary structure) data.
HydrogenBondComponent  
LabelComponent  
MonitorComponent  
Relation_Conformation_Atom This class represents a relationship between the Conformation and the Atom StructureComponent class.
Residue Implements a StructureComponent container for residue information.
ResidueLabelComponent  
Sequence  
StericBumpComponent  
Strand Implements a StructureComponent container for Strand conformation (secondary structure) data.
Structure This class provides the primary interface for a molecular structure object.
StructureComponent Defines the abstract base class for a StructureComponent data container.
StructureComponentEvent Properties, data, or the organizational structure of data changed.
StructureComponentIterator Defines a standard interface to describe a filter implementation class.
StructureComponentRegistry A class used to register StructureComponent types and their relationships (much like a database schema defines tables and their relational links).
StructureComponentRelation A class used to store a single relationship description between two StructureComponent types (much like a relational link between tables in a database).
StructureInfo Implements a StructureComponent container for Structure information data.
StructureMap This class implements a derived data map for a Structure object.
Symmetry Implements a StructureComponent container for Symmetry data.
Turn Implements a StructureComponent container for Turn conformation (secondary structure) data.