#EntityType names: English EntityType_CL.UNKNOWN =Unknown EntityType_CL.MACROMOLECULE =Macromolecule EntityType_CL.NUCLEIC_ACID =Nucleic Acid (RNA or DNA) EntityType_CL.PROTEIN =Protein EntityType_CL.COMPOUND =Compound EntityType_CL.DISCRETE_CHARACTER =Discrete Character EntityType_CL.CONTINUOUS_CHARACTER =Continuous Character EntityType_CL.TAXON =Taxon EntityType_CL.APPLICATION_DATA =Application Data #deprecated EntityType_CL.DNA =DNA EntityType_CL.RNA =RNA EntityType_CL.CALCULATED_RESULT =Calculated Result #DataType names: English DataType_CL.UNKNOWN =Unknown DataType_CL.SEQUENCE =Sequence DataType_CL.STRUCTURE =Structure DataType_CL.SEQUENCE_ALIGNMENT =Sequence Alignment DataType_CL.MATRIX =Matrix DataType_CL.PHYLOGENETIC_TREE =Phylogenetic Tree DataType_CL.BLAST_OUTPUT =BLAST Output DataType_CL.FASTA_OUTPUT =FASTA Output DataType_CL.SIMILARITY_SEARCH_HIT =Similarity Search Hit DataType_CL.SERIALIZED_BINARY =Binary Object #deprecated DataType_CL.STRUCTURE_ALIGNMENT =Structure Alignment DataType_CL.DISTANCE_MATRIX =Distance Matrix DataType_CL.SIMILARITY_SEARCH_RESULT =Similarity Search Result DataType_CL.TAXON =Taxon DataType_CL.IMAGE =Image #RecordType names: English RecordType_CL.UNKNOWN =Unknown RecordType_CL.SERIALIZED_APPLICATION_DATA =Application Data RecordType_CL.NUCLEIC_ACID_MATRIX =Nucleic Acid Matrix RecordType_CL.PROTEIN_MATRIX =Protein Matrix RecordType_CL.DISCRETE_CHARACTER_MATRIX =Discrete Character Matrix RecordType_CL.CONTINUOUS_CHARACTER_MATRIX =Continuous Character Matrix RecordType_CL.TAXON_PHYLOGENETIC_TREE =Phylogenetic Tree RecordType_CL.NUCLEIC_ACID_PHYLOGENETIC_TREE =Nucleic Acid Phylogenetic Tree RecordType_CL.PROTEIN_PHYLOGENETIC_TREE =Protein Phylogenetic Tree RecordType_CL.MACROMOLECULE_SEQUENCE =Macromolecule Sequence RecordType_CL.NUCLEIC_ACID_SEQUENCE =Nucleic Acid Sequence RecordType_CL.PROTEIN_SEQUENCE =Protein Sequence RecordType_CL.COMPOUND_STRUCTURE =Compound Structure RecordType_CL.NUCLEIC_ACID_STRUCTURE =Nucleic Acid Structure RecordType_CL.PROTEIN_STRUCTURE =Protein Structure RecordType_CL.MACROMOLECULE_BLAST_OUTPUT =Macromolecule BLAST Output RecordType_CL.NUCLEIC_ACID_BLAST_OUTPUT =Nucleic Acid BLAST Output RecordType_CL.PROTEIN_BLAST_OUTPUT =Protein BLAST Output RecordType_CL.MACROMOLECULE_FASTA_OUTPUT =Macromolecule FASTA Output RecordType_CL.NUCLEIC_ACID_FASTA_OUTPUT =Nucleic Acid FASTA Output RecordType_CL.PROTEIN_FASTA_OUTPUT =Protein FASTA Output RecordType_CL.NUCLEIC_ACID_SIMILARITY_SEARCH_HIT =Nucleic Acid Similarity Search Hit RecordType_CL.PROTEIN_SIMILARITY_SEARCH_HIT =Protein Similarity Search Hit RecordType_CL.PROTEIN_STRUCTURE_CHAIN_SIMILARITY_SEARCH_HIT=Protein Structure Chain Similarity Search Hit RecordType_CL.MACROMOLECULE_SEQUENCE_ALIGNMENT =Macromolecule Sequence Alignment RecordType_CL.NUCLEIC_ACID_SEQUENCE_ALIGNMENT =Nucleic Acid Sequence Alignment RecordType_CL.PROTEIN_SEQUENCE_ALIGNMENT =Protein Sequence Alignment #deprecated RecordType_CL.NUCLEIC_ACID_SIMILARITY_SEARCH_RESULT =Nucleic Acid Similarity Search Result RecordType_CL.PROTEIN_SIMILARITY_SEARCH_RESULT =Protein Similarity Search Result RecordType_CL.NUCLEIC_ACID_BLAST_HIT =Nucleic Acid Blast Hit RecordType_CL.PROTEIN_BLAST_HIT =Protein Blast Hit RecordType_CL.APPLICATION_DATA_SERIALIZED_BINARY =Application Data #DataFormat names: English DataFormat_CL.UNKNOWN =Unknown DataFormat_CL.CANNONICAL =Generic (Unformatted) DataFormat_CL.CSV =Character (Comma) Separated Values [.csv] DataFormat_CL.HTML =Generic HTML [.html, .htm] DataFormat_CL.XML =Generic XML [.xml] DataFormat_CL.FASTA =FASTA [.fsa, .fasta, .fst] DataFormat_CL.EMBL =EMBL [.emb] DataFormat_CL.EMBL_XML =EMBL XML [.emb.xml] DataFormat_CL.UNIPROT =Uniprot (Swissprot) DataFormat_CL.UNIPROT_XML =Uniprot XML DataFormat_CL.GENBANK =Genbank [.gbk] DataFormat_CL.GENPEPT =Genpept (Genbank) [.gbk, .gpt] DataFormat_CL.PHRED =Phred Sequence [.phred] DataFormat_CL.SCF =Standard Chromatogram [.scf] DataFormat_CL.GFF =SignalMap Gene-Finding [.gff] DataFormat_CL.NBRF =NBRF (PIR) Sequence [.pir] DataFormat_CL.RAW =RAW Sequence [.raw] DataFormat_CL.GCG =GCG Single Sequence [.gcg] DataFormat_CL.RSF =GCG Multiple Sequence [.rsf] DataFormat_CL.PDB =PDB [.pdb] DataFormat_CL.PDB_FINDER =PDBFinder [.pdbf] DataFormat_CL.MMCIF =mmCif [.cif] DataFormat_CL.MSF =MSF [.msf] DataFormat_CL.ALN =ALN (Clustal) [.aln] DataFormat_CL.PHYLIP =PHYLIP [.phy] DataFormat_CL.BLAST_TAB =Blast Tabular Output DataFormat_CL.BLAST_TEXT =Blast Text Output DataFormat_CL.BLAST_XML =Blast XML Output DataFormat_CL.NEXUS =Nexus [.nex] DataFormat_CL.NEWICK =Newick (Phylip) Tree [.dnd] DataFormat_CL.XFIG =XFIG Output [.xfig] DataFormat_CL.EPS =Encapsulated Postscript [.eps] DataFormat_CL.POSTSCRIPT =Postscript [.ps] DataFormat_CL.PICT =PICT Image [.pct, .pict] DataFormat_CL.JPEG =JPEG Image [.jpg, .jpeg] DataFormat_CL.CLUSTAL =Clustal DataFormat_CL.SIRIUSWB =Sirius Applet View DataFormat_CL.NEEDLE =Needle DataFormat_CL.HENNIG86 =Hennig86 DataFormat_CL.FASTOUT =Fasta Output #Dataset names: English Dataset_CL.GBBCT =GBBCT: GenBank Bacterial Sequences Dataset_CL.GBCON =GBCON: GenBank Contigs Dataset_CL.GBENV =GBENV: GenBank Environmental Sampling Sequences Dataset_CL.GBEST =GBEST: GenBank EST Sequences Dataset_CL.GBGSS =GBGSS: GenBank Genome Survey Sequences Dataset_CL.GBHTC =GBHTC: GenBank High Throughput cDNA Sequencing Dataset_CL.GBHTG =GBHTG: GenBank High Throughput Genomic Sequencing Dataset_CL.GBINV =GBINV: GenBank Invertebrate Sequences Dataset_CL.GBMAM =GBMAM: GenBank Other Mammalian Sequences Dataset_CL.GBPAT =GBPAT: GenBank Patent Sequences Dataset_CL.GBPHG =GBPHG: GenBank Phage Sequences Dataset_CL.GBPLN =GBPLN: GenBank Plant Sequences Dataset_CL.GBPRI =GBPRI: GenBank Primate Sequences Dataset_CL.GBROD =GBROD: GenBank Rodent Sequences Dataset_CL.GBSTS =GBSTS: GenBank Sequence Tagged Site Entries Dataset_CL.GBSYN =GBSYN: GenBank Synthetic Sequences Dataset_CL.GBUNA =GBUNA: GenBank Unannotated Sequences Dataset_CL.GBVRL =GBVRL: GenBank Viral Sequences Dataset_CL.GBVRT =GBVRT: GenBank Other Vertebrate Sequences Dataset_CL.UNIPROT =UNIPROT Dataset_CL.SWISSPROT=SWISSPROT Dataset_CL.TREMBL =TREMBL Dataset_CL.PDB =PDB #RecordField names: English RecordField_CL.PRIMARY_ID =Primary ID RecordField_CL.ALTERNATIVE_ID =Alternative ID RecordField_CL.NAME =Name RecordField_CL.ORGANISM =Organism RecordField_CL.VERSION =Version RecordField_CL.TYPE =Type RecordField_CL.RESOLUTION =Resolution RecordField_CL.AUTHOR =Author RecordField_CL.MOLECULE =Molecule RecordField_CL.DEPOSITION_DATE =Deposition Date RecordField_CL.MODIFICATION_DATE =Modification Date RecordField_CL.E_VALUE =e-Value RecordField_CL.SCORE =Score RecordField_CL.DATASET =Dataset RecordField_CL.PROGRAM =Program RecordField_CL.SCORING_MATRIX =Scoring Matrix RecordField_CL.PROGRAM_VERSION =Program Version RecordField_CL.LENGTH =Length RecordField_CL.NUMBER_OF_ALIGNED_SEQUENCES =Aligned Sequences RecordField_CL.NUMBER_OF_HITS =Hits RecordField_CL.NUMBER_OF_BYTES =Size (Bytes) RecordField_CL.NUMBER_OF_LETTERS =Letters RecordField_CL.NUMBER_OF_SEQUENCES =Sequences RecordField_CL.GAP_PENALTY =Gap Penalty RecordField_CL.GAP_EXTENSION_PENALTY =Gap Extension Penalty RecordField_CL.QUERY =Query RecordField_CL.CHAIN =Chain #deprecated RecordField_CL.MOLECULAR_WEIGHT =Molecular Weight RecordField_CL.ISOELECTRIC_POINT =Isoelectric Point RecordField_CL.SEQUENCE =Sequence RecordField_CL.CLASSIFICATION =Classification RecordField_CL.NUMBER_OF_POSITIVES =Number of Positives RecordField_CL.NUMBER_OF_IDENTITIES =Number of Identities RecordField_CL.PERCENTAGE_IDENTITY =Percentage Identity RecordField_CL.QUERY_ID =Query ID RecordField_CL.SUBJECT_ID =Subject ID RecordField_CL.QUERY_START =Query Start RecordField_CL.QUERY_END =Query End RecordField_CL.SUBJECT_START =Subject Start RecordField_CL.SUBJECT_END =Subject End RecordField_CL.ALIGNED_QUERY_SEQUENCE =Aligned Query Sequence RecordField_CL.ALIGNED_SUBJECT_SEQUENCE =Aligned Subject Sequence RecordField_CL.ALIGNMENT_LENGTH =Alignment Length #Known output file MIME content types FileType_CL.txt =text/plain FileType_CL.html =text/html FileType_CL.png =image/png FileType_CL.pict =image/x-pict FileType_CL.ps =application/postscript FileType_CL.pdf =application/pdf