File menu operations

File option Explanation
New sequence This option opens a dialog with a name and sequence text fields. It allows the user to enter or paste the sequence and assign a name to it.
Open sequence file This option will read a FASTA or CLUSTALW file from the local system.
Save sequences This will save currently displayed sequences to a FASTA or CLUSTALW file
Print Setup Set up paper orientation and other standard printing options.
Print Send the alignment to a printer or PDF file.