package edu.sdsc.mbt;

import edu.sdsc.mbt.util.*;
import edu.sdsc.mbt.viewables.StylesPreferences;

public class StericBumpComponent extends AnnotationComponent {
	
	public Atom atom1;
	public Atom atom2;
	
	public double[] start = new double[3];
	public double[] end = new double[3];
	
	public String label;
	private int TYPE = AnnotationComponentRegistry.TYPE_STERIC_BUMP;
	
	public float[] color = new float[]{ 1.0f, 0.0f, 0.0f };
	
	public StericBumpComponent(Atom atom1, Atom atom2, String label){
		this.atom1 = atom1;
		this.atom2 = atom2;
		
		start = atom1.coordinate;
		end = atom2.coordinate;
		
		this.label = label;
	}
	
	public int getType(){
		return TYPE;
	}
	
	public float[] getColor(){
		if (selected){
			return StylesPreferences.selectionColor;
		}
		else{
			return color;
		}
	}
	
	private boolean selected = false;
	private boolean visible = true;
	
	public void resetCoordinates(){
		start = atom1.coordinate;
		end = atom2.coordinate;
	}
	
	public double getDistance(){
		return Algebra.distance(atom1.coordinate, atom2.coordinate);
	}
	
	public void setSelected(boolean selected){
		this.selected = selected;
	}
	
	public boolean getSelected(){
		return selected;
	}

	public final boolean getVisible() {
		return visible;
	}

	public final void setVisible(boolean visible) {
		this.visible = visible;
	}
	
	
}