package edu.sdsc.mbt;

import edu.sdsc.sirius.viewers.SequenceViewerImpl.*;

public class Sequence {
	
	private String sequence;
	private String name;
	private Cell[] cells;
	
	private SequenceStyles sequenceStyles;
	
	public Sequence(String name, String sequence){
		this.name = name;
		this.sequence = sequence;
		
		sequenceStyles = new SequenceStyles(this);
	}

	public String getName(){
		return name;
	}

	public void setName(String name) {
		this.name = name;
	}

	public String getSequence() {
		return sequence;
	}

	public void setSequence(String sequence) {
		this.sequence = sequence;
	}
	
	public Cell[] getCells(){
		return cells;
	}
	
	public void setCells(Cell[] cells){
		this.cells = cells;
		this.getSequenceStyles().setCells(cells);
	}
	
	public SequenceStyles getSequenceStyles(){
		if (sequenceStyles == null) sequenceStyles = new SequenceStyles(this);
		return sequenceStyles;
	}
}