<%@ include file="/common/taglibs.jsp"%> REST API Help

Analysis and Tool Selection & Configuration

This form helps you to determine the required parameters needed in your HTTP POST message when using the REST API: The valid options for the analysis and tool are based on the datatype, filetype, and ntaxa of you datafile. Once the selections are made, a popup window allows you to configure the parameters. Finally, a new link will appear to allow you to download the file which contains the configured parameters. This is your configfile to be sent in your POST message.
Note: make sure to press "Start Over" button to make a new selection

Analysis and Tool Selection
: --- Choose a datatype --- : --- Choose a filetype --- : --- Choose ntaxa ---
${ServiceObject.toolAbbreviation} RESTAPI ${ServiceObject.sessionId} ${ServiceObject.sessionCount} ${ServiceObject.toolFile}
: --- Choose an Analysis --- : --- Choose a Tool ---
  Configure parameters for selected analysis and tool:     Configure Parameters
  Download configuration file for selected analysis and tool:     Download Configuration File
  Start Over
  BI = Bayesian Inference
ML = Maximum likelihood tree inference
MP = Parsimony tree inference
GTR+I+G = General time reversible model with Gamma-distributed among- site rate heterogeneity and invariant sites
GTR+G = General time reversible model with Gamma-distributed among- site rate heterogeneity
WAG+Gamma+F = WAG + Gamma + Empirical State Frequencies
MSA=Multiple Sequence Alignment
RAxML-Boot = Bootstrap-RAxML