cdat/lib/Bio/CDAT.pm
cdat/lib/Bio/CDAT/Mediator.pm
cdat/lib/Bio/CDAT/MediatorI.pm
cdat/lib/Bio/CDAT/QIU/CDAT.pm
cdat/lib/Bio/CDAT/QIU/CDAT/Character.pm
cdat/lib/Bio/CDAT/QIU/CDAT/Graphics.pm
cdat/lib/Bio/CDAT/QIU/CDAT/Matrix.pm
cdat/lib/Bio/CDAT/QIU/CDAT/Matrix/Align.pm
cdat/lib/Bio/CDAT/QIU/CDAT/State.pm
cdat/lib/Bio/CDAT/QIU/README
cdat/lib/Bio/CDAT/README
cdat/lib/Bio/CDAT/Root.pm
cdat/lib/Bio/CDAT/VOS/CDAT.pm
cdat/lib/Bio/CDAT/VOS/CharMatrixI.pm
cdat/lib/Bio/CDAT/VOS/Taxon.pm
cdat/Makefile.PL
cdat/MANIFEST
cdat/META.yml
cdat/README
cdat/t/BBA24.nuc.aln
cdat/t/BBA24.nuc.phy
cdat/t/BBA24.pep.aln
cdat/t/BBA24.png
cdat/t/BBA24.tree
cdat/t/cdat.pl
cdat/t/README
cdat/t/test-cdat.pl
cipres/bin/AsyncTreeInfer.PL
cipres/bin/AsyncTreeIterator.PL
cipres/bin/cipresd.PL
cipres/bin/regman.PL
cipres/bin/regsrv.PL
cipres/bin/regsrv_makepwd.PL
cipres/bin/xixi.PL
cipres/Build.PL
cipres/cipres.kpf
cipres/lib/Cipres.pm
cipres/lib/Cipres/CipresProperties.pm
cipres/lib/Cipres/CorbaService.pm
cipres/lib/Cipres/IDL.pm
cipres/lib/Cipres/IDL/CipresIDL_api1.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Advisor.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Advisor_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Advisor_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Advisor_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/AsyncTreeInfer.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/AsyncTreeInfer_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/AsyncTreeInfer_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/AsyncTreeInfer_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/AsyncTreeIterator.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/AsyncTreeIterator_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/AsyncTreeIterator_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/AsyncTreeIterator_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/CharacterDB.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/CharacterDB_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/CharacterDB_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/CharacterDB_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/ChDBFactory.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/ChDBFactory_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/ChDBFactory_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/ChDBFactory_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/CipresProperties.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/CipresProperties_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/CipresProperties_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/CipresProperties_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/ConsensusTreeCalculator.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/ConsensusTreeCalculator_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/ConsensusTreeCalculator_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/ConsensusTreeCalculator_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/DelegatingTreeImprove.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/DelegatingTreeImprove_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/DelegatingTreeImprove_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/DelegatingTreeImprove_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/LifeCycle.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/LifeCycle_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/LifeCycle_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/LifeCycle_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/MatrixAlign.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/MatrixAlign_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/MatrixAlign_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/MatrixAlign_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/ObjectFactory.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/ObjectFactory_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/ObjectFactory_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/ObjectFactory_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Properties.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Properties_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Properties_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Properties_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/ReadNexus.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/ReadNexus_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/ReadNexus_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/ReadNexus_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/RecursiveScriptable.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/RecursiveScriptable_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/RecursiveScriptable_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/RecursiveScriptable_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Registry.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Registry_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Registry_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Registry_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/RendezVous.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/RendezVous_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/RendezVous_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/RendezVous_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Rid3TreeImprove.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Rid3TreeImprove_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Rid3TreeImprove_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Rid3TreeImprove_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Scriptable.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Scriptable_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Scriptable_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/Scriptable_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/SequentialTreeSupplier.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/SequentialTreeSupplier_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/SequentialTreeSupplier_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/SequentialTreeSupplier_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeDB.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeDB_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeDB_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeDB_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeDBFactory.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeDBFactory_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeDBFactory_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeDBFactory_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeDecompose.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeDecompose_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeDecompose_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeDecompose_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeEvaluate.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeEvaluate_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeEvaluate_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeEvaluate_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeImprove.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeImprove_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeImprove_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeImprove_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeInfer.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeInfer_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeInfer_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeInfer_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeIterator.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeIterator_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeIterator_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeIterator_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeMerge.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeMerge_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeMerge_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeMerge_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreePrune.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreePrune_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreePrune_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreePrune_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeRefine.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeRefine_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeRefine_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeRefine_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeSupplier.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeSupplier_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeSupplier_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/TreeSupplier_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/WriteNexus.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/WriteNexus_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/WriteNexus_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api1/WriteNexus_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/AttachmentInput.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/AttachmentInput_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/AttachmentInput_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/AttachmentInput_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/AttachmentOutput.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/AttachmentOutput_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/AttachmentOutput_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/AttachmentOutput_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/AttachmentSeqInput.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/AttachmentSeqInput_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/AttachmentSeqInput_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/AttachmentSeqInput_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/AttachmentSeqOutput.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/AttachmentSeqOutput_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/AttachmentSeqOutput_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/AttachmentSeqOutput_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/DataMatrixInput.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/DataMatrixInput_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/DataMatrixInput_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/DataMatrixInput_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/DataMatrixOutput.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/DataMatrixOutput_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/DataMatrixOutput_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/DataMatrixOutput_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/Iterator.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/Iterator_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/Iterator_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/Iterator_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/LifeCycle.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/LifeCycle_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/LifeCycle_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/LifeCycle_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/ModelEncoding.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/ModelSupplier.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/ModelSupplier_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/ModelSupplier_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/ModelSupplier_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/NumericBound.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/ObjectFactory.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/ObjectFactory_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/ObjectFactory_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/ObjectFactory_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/OpCode.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/ParamConstraint.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/ParamScope.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/ParamValue.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/RecursiveScriptable.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/RecursiveScriptable_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/RecursiveScriptable_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/RecursiveScriptable_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/RendezVous.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/RendezVous_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/RendezVous_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/RendezVous_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/Scriptable.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/Scriptable_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/Scriptable_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/Scriptable_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/Stack.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/Stack_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/Stack_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/Stack_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TaxaInput.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TaxaInput_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TaxaInput_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TaxaInput_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TaxaOutput.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TaxaOutput_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TaxaOutput_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TaxaOutput_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TaxonInput.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TaxonInput_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TaxonInput_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TaxonInput_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TaxonOutput.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TaxonOutput_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TaxonOutput_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TaxonOutput_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeDB.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeDB_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeDB_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeDB_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeDBFactory.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeDBFactory_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeDBFactory_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeDBFactory_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeInput.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeInput_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeInput_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeInput_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeOutput.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeOutput_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeOutput_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeOutput_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeScoreInput.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeScoreInput_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeScoreInput_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeScoreInput_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeScoreOutput.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeScoreOutput_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeScoreOutput_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreeScoreOutput_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreesInput.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreesInput_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreesInput_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreesInput_types.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreesOutput.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreesOutput_impl.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreesOutput_skel.pm
cipres/lib/Cipres/IDL/CipresIDL_api2/TreesOutput_types.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ConsumerAdmin.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ConsumerAdmin_impl.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ConsumerAdmin_skel.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ConsumerAdmin_types.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/EventChannel.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/EventChannel_impl.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/EventChannel_skel.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/EventChannel_types.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ProxyPullConsumer.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ProxyPullConsumer_impl.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ProxyPullConsumer_skel.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ProxyPullConsumer_types.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ProxyPullSupplier.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ProxyPullSupplier_impl.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ProxyPullSupplier_skel.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ProxyPullSupplier_types.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ProxyPushConsumer.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ProxyPushConsumer_impl.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ProxyPushConsumer_skel.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ProxyPushConsumer_types.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ProxyPushSupplier.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ProxyPushSupplier_impl.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ProxyPushSupplier_skel.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/ProxyPushSupplier_types.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/SupplierAdmin.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/SupplierAdmin_impl.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/SupplierAdmin_skel.pm
cipres/lib/Cipres/IDL/CosEventChannelAdmin/SupplierAdmin_types.pm
cipres/lib/Cipres/IDL/CosEventComm.pm
cipres/lib/Cipres/IDL/CosEventComm/PullConsumer.pm
cipres/lib/Cipres/IDL/CosEventComm/PullConsumer_impl.pm
cipres/lib/Cipres/IDL/CosEventComm/PullConsumer_skel.pm
cipres/lib/Cipres/IDL/CosEventComm/PullConsumer_types.pm
cipres/lib/Cipres/IDL/CosEventComm/PullSupplier.pm
cipres/lib/Cipres/IDL/CosEventComm/PullSupplier_impl.pm
cipres/lib/Cipres/IDL/CosEventComm/PullSupplier_skel.pm
cipres/lib/Cipres/IDL/CosEventComm/PullSupplier_types.pm
cipres/lib/Cipres/IDL/CosEventComm/PushConsumer.pm
cipres/lib/Cipres/IDL/CosEventComm/PushConsumer_impl.pm
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cipres/lib/Cipres/IDL/CosEventComm/PushConsumer_types.pm
cipres/lib/Cipres/IDL/CosEventComm/PushSupplier.pm
cipres/lib/Cipres/IDL/CosEventComm/PushSupplier_impl.pm
cipres/lib/Cipres/IDL/CosEventComm/PushSupplier_skel.pm
cipres/lib/Cipres/IDL/CosEventComm/PushSupplier_types.pm
cipres/lib/Cipres/Implementations/
cipres/lib/Cipres/Interfaces/
cipres/lib/Cipres/Objects.pm
cipres/lib/Cipres/Objects/Char.pm
cipres/lib/Cipres/Objects/CharMatrix.pm
cipres/lib/Cipres/Objects/CharSeq.pm
cipres/lib/Cipres/Objects/Forest.pm
cipres/lib/Cipres/Objects/Node.pm
cipres/lib/Cipres/Objects/Taxa.pm
cipres/lib/Cipres/Objects/Taxon.pm
cipres/lib/Cipres/Objects/Tree.pm
cipres/lib/Cipres/Registry.pm
cipres/lib/Cipres/Registry/BufferServer.pm
cipres/lib/Cipres/Registry/Config.pm
cipres/lib/Cipres/Registry/Observable.pm
cipres/lib/Cipres/Registry/Wx/App.pm
cipres/lib/Cipres/Registry/Wx/Controller.pm
cipres/lib/Cipres/Registry/Wx/View.pm
cipres/lib/Cipres/Registry/XUL/App.pm
cipres/lib/Cipres/Registry/XUL/View.pm
cipres/lib/Cipres/ServiceInstaller.pm
cipres/lib/Cipres/Services/Mrbayes.pm
cipres/lib/Cipres/SuperClasses/Authenticator.pm
cipres/lib/Cipres/SuperClasses/CorbaClient.pm
cipres/lib/Cipres/SuperClasses/ProcessLauncher.pm
cipres/lib/Cipres/SuperClasses/Root.pm
cipres/lib/Cipres/Util.pod
cipres/lib/Cipres/Util/Client.pm
cipres/lib/Cipres/Util/Properties.pm
cipres/lib/Cipres/Util/Service.pm
cipres/lib/Cipres/Util/TypeConverter.pm
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cpan/authors/id/B/BC/BCT/CGI-Ajax-0.701.tar.gz
cpan/authors/id/B/BC/BCT/CHECKSUMS
cpan/authors/id/D/DA/DAGOLDEN/CHECKSUMS
cpan/authors/id/D/DA/DAGOLDEN/Sub-Uplevel-0.14.tar.gz
cpan/authors/id/D/DC/DCOPPIT/Benchmark-Timer-0.7100.tar.gz
cpan/authors/id/D/DC/DCOPPIT/CHECKSUMS
cpan/authors/id/D/DR/DROLSKY/Params-Validate-0.86.tar.gz
cpan/authors/id/D/DR/DROLSKY/CHECKSUMS
cpan/authors/id/D/DR/DROLSKY/Devel-StackTrace-1.13.tar.gz
cpan/authors/id/D/DR/DROLSKY/Exception-Class-1.23.tar.gz
cpan/authors/id/D/DR/DROLSKY/Log-Dispatch-2.12.tar.gz
cpan/authors/id/E/EI/EILARA/Aspect-0.11.tar.gz
cpan/authors/id/E/EI/EILARA/CHECKSUMS
cpan/authors/id/E/EI/EILARA/XUL-Node-0.05.tar.gz
cpan/authors/id/G/GA/GAAS/CHECKSUMS
cpan/authors/id/G/GA/GAAS/Digest-MD5-2.36.tar.gz
cpan/authors/id/G/GA/GAAS/libwww-perl-5.805.tar.gz
cpan/authors/id/G/GB/GBARR/CHECKSUMS
cpan/authors/id/G/GB/GBARR/Scalar-List-Utils-1.14.tar.gz
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cpan/authors/id/G/GR/GREGFAST/CHECKSUMS
cpan/authors/id/G/GR/GREGFAST/POE-Component-Server-HTTPServer-0.9.2.tar.gz
cpan/authors/id/G/GR/GROMMEL/CHECKSUMS
cpan/authors/id/G/GR/GROMMEL/Math-Random-0.69.tar.gz
cpan/authors/id/K/KA/KASEI/CHECKSUMS
cpan/authors/id/K/KA/KASEI/Class-Accessor-0.30.tar.gz
cpan/authors/id/K/KW/KWILLIAMS/CHECKSUMS
cpan/authors/id/K/KW/KWILLIAMS/Module-Build-0.2805.tar.gz
cpan/authors/id/M/MA/MARKOV/CHECKSUMS
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cpan/authors/id/M/MI/MIROD/CHECKSUMS
cpan/authors/id/M/MI/MIROD/XML-Twig-3.29.tar.gz
cpan/authors/id/M/MS/MSCHILLI/CHECKSUMS
cpan/authors/id/M/MS/MSCHILLI/Log-Log4perl-1.06.tar.gz
cpan/authors/id/M/MS/MSCHWERN/CHECKSUMS
cpan/authors/id/M/MS/MSCHWERN/Test-Simple-0.66.tar.gz
cpan/authors/id/M/MS/MSCHWERN/Test-Simple-0.65.tar.gz
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cpan/authors/id/M/MS/MSERGEANT
cpan/authors/id/M/MS/MSERGEANT/CHECKSUMS
cpan/authors/id/M/MS/MSERGEANT/XML-Parser-2.34.tar.gz
cpan/authors/id/R/RC/RCAPUTO/CHECKSUMS
cpan/authors/id/R/RC/RCAPUTO/POE-0.9917.tar.gz
cpan/authors/id/R/RO/RONAN/CHECKSUMS
cpan/authors/id/R/RO/RONAN/SVG-2.33.tar.gz
cpan/authors/id/R/RV/RVOSA/CHECKSUMS
cpan/authors/id/R/RV/RVOSA/Exception-Class-TCF-0.03.tar.gz
cpan/authors/id/README
cpan/authors/id/T/TE/TELS/CHECKSUMS
cpan/authors/id/T/TE/TELS/Math-BigInt-1.77.tar.gz
cpan/authors/id/T/TM/TMTM/CHECKSUMS
cpan/authors/id/T/TM/TMTM/Class-Data-Inheritable-0.06.tar.gz
cpan/authors/id/X/XA/XANTUS/CHECKSUMS
cpan/authors/id/X/XA/XANTUS/POE-Component-XUL-0.02.tar.gz
cpan/modules/02packages.details.txt.gz
cpan/modules/03modlist.data.gz
cpan/README
doc/README.txt
etc/Cipres/Config.pm
etc/Cipres/Prereq.pm
etc/perlvars.bashrc
etc/perlvars.bat
expat-2.0.0/amiga/expat.xml
expat-2.0.0/amiga/expat_lib.c
expat-2.0.0/amiga/expat_vectors.c
expat-2.0.0/amiga/include/inline4/expat.h
expat-2.0.0/amiga/include/interfaces/expat.h
expat-2.0.0/amiga/include/libraries/expat.h
expat-2.0.0/amiga/include/proto/expat.h
expat-2.0.0/amiga/launch.c
expat-2.0.0/amiga/Makefile
expat-2.0.0/amiga/README.txt
expat-2.0.0/amiga/stdlib.c
expat-2.0.0/bcb5/all_projects.bpg
expat-2.0.0/bcb5/elements.bpf
expat-2.0.0/bcb5/elements.bpr
expat-2.0.0/bcb5/elements.mak
expat-2.0.0/bcb5/expat.bpf
expat-2.0.0/bcb5/expat.bpr
expat-2.0.0/bcb5/expat.mak
expat-2.0.0/bcb5/expat_static.bpf
expat-2.0.0/bcb5/expat_static.bpr
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expat-2.0.0/bcb5/expatw.bpf
expat-2.0.0/bcb5/expatw.bpr
expat-2.0.0/bcb5/expatw.mak
expat-2.0.0/bcb5/expatw_static.bpf
expat-2.0.0/bcb5/expatw_static.bpr
expat-2.0.0/bcb5/expatw_static.mak
expat-2.0.0/bcb5/libexpat_mtd.def
expat-2.0.0/bcb5/libexpatw_mtd.def
expat-2.0.0/bcb5/makefile.mak
expat-2.0.0/bcb5/outline.bpf
expat-2.0.0/bcb5/outline.bpr
expat-2.0.0/bcb5/outline.mak
expat-2.0.0/bcb5/README.txt
expat-2.0.0/bcb5/setup.bat
expat-2.0.0/bcb5/xmlwf.bpf
expat-2.0.0/bcb5/xmlwf.bpr
expat-2.0.0/bcb5/xmlwf.mak
expat-2.0.0/Changes
expat-2.0.0/config.log
expat-2.0.0/configure
expat-2.0.0/configure.in
expat-2.0.0/conftools/ac_c_bigendian_cross.m4
expat-2.0.0/conftools/config.guess
expat-2.0.0/conftools/config.sub
expat-2.0.0/conftools/expat.m4
expat-2.0.0/conftools/get-version.sh
expat-2.0.0/conftools/install-sh
expat-2.0.0/conftools/libtool.m4
expat-2.0.0/conftools/ltmain.sh
expat-2.0.0/conftools/mkinstalldirs
expat-2.0.0/conftools/PrintPath
expat-2.0.0/COPYING
expat-2.0.0/doc/expat.png
expat-2.0.0/doc/reference.html
expat-2.0.0/doc/style.css
expat-2.0.0/doc/valid-xhtml10.png
expat-2.0.0/doc/xmlwf.1
expat-2.0.0/doc/xmlwf.sgml
expat-2.0.0/examples/elements.c
expat-2.0.0/examples/elements.dsp
expat-2.0.0/examples/outline.c
expat-2.0.0/examples/outline.dsp
expat-2.0.0/expat.dsw
expat-2.0.0/expat_config.h
expat-2.0.0/expat_config.h.in
expat-2.0.0/lib/amigaconfig.h
expat-2.0.0/lib/ascii.h
expat-2.0.0/lib/asciitab.h
expat-2.0.0/lib/expat.dsp
expat-2.0.0/lib/expat.h
expat-2.0.0/lib/expat_external.h
expat-2.0.0/lib/expat_static.dsp
expat-2.0.0/lib/expatw.dsp
expat-2.0.0/lib/expatw_static.dsp
expat-2.0.0/lib/iasciitab.h
expat-2.0.0/lib/internal.h
expat-2.0.0/lib/latin1tab.h
expat-2.0.0/lib/libexpat.def
expat-2.0.0/lib/libexpatw.def
expat-2.0.0/lib/macconfig.h
expat-2.0.0/lib/Makefile.MPW
expat-2.0.0/lib/nametab.h
expat-2.0.0/lib/utf8tab.h
expat-2.0.0/lib/winconfig.h
expat-2.0.0/lib/xmlparse.c
expat-2.0.0/lib/xmlparse.lo
expat-2.0.0/lib/xmlparse.o
expat-2.0.0/lib/xmlrole.c
expat-2.0.0/lib/xmlrole.h
expat-2.0.0/lib/xmlrole.lo
expat-2.0.0/lib/xmlrole.o
expat-2.0.0/lib/xmltok.c
expat-2.0.0/lib/xmltok.h
expat-2.0.0/lib/xmltok.lo
expat-2.0.0/lib/xmltok.o
expat-2.0.0/lib/xmltok_impl.c
expat-2.0.0/lib/xmltok_impl.h
expat-2.0.0/lib/xmltok_ns.c
expat-2.0.0/libexpat.la
expat-2.0.0/libtool
expat-2.0.0/Makefile
expat-2.0.0/Makefile.in
expat-2.0.0/MANIFEST
expat-2.0.0/README
expat-2.0.0/tests/benchmark
expat-2.0.0/tests/benchmark/benchmark.c
expat-2.0.0/tests/benchmark/benchmark.dsp
expat-2.0.0/tests/benchmark/benchmark.dsw
expat-2.0.0/tests/benchmark/README.txt
expat-2.0.0/tests/chardata.c
expat-2.0.0/tests/chardata.h
expat-2.0.0/tests/minicheck.c
expat-2.0.0/tests/minicheck.h
expat-2.0.0/tests/README.txt
expat-2.0.0/tests/runtests.c
expat-2.0.0/tests/runtestspp.cpp
expat-2.0.0/tests/xmltest.sh
expat-2.0.0/vms/descrip.mms
expat-2.0.0/vms/expat_config.h
expat-2.0.0/vms/README.vms
expat-2.0.0/win32/expat.iss
expat-2.0.0/win32/MANIFEST.txt
expat-2.0.0/win32/README.txt
expat-2.0.0/xmlwf/codepage.c
expat-2.0.0/xmlwf/codepage.h
expat-2.0.0/xmlwf/codepage.o
expat-2.0.0/xmlwf/ct.c
expat-2.0.0/xmlwf/filemap.h
expat-2.0.0/xmlwf/readfilemap.c
expat-2.0.0/xmlwf/unixfilemap.c
expat-2.0.0/xmlwf/unixfilemap.o
expat-2.0.0/xmlwf/win32filemap.c
expat-2.0.0/xmlwf/xmlfile.c
expat-2.0.0/xmlwf/xmlfile.h
expat-2.0.0/xmlwf/xmlfile.o
expat-2.0.0/xmlwf/xmlmime.c
expat-2.0.0/xmlwf/xmlmime.h
expat-2.0.0/xmlwf/xmltchar.h
expat-2.0.0/xmlwf/xmlurl.h
expat-2.0.0/xmlwf/xmlwf
expat-2.0.0/xmlwf/xmlwf.c
expat-2.0.0/xmlwf/xmlwf.dsp
expat-2.0.0/xmlwf/xmlwf.o
expat-2.0.0/xmlwf/xmlwin32url.cxx
inc/Config.pm
inc/Installer.pm
inc/Installer/BuildTools.pm
inc/Installer/ConfigFileWriter.pm
inc/Installer/CPAN.pm
inc/Installer/EnvChecker.pm
inc/Installer/EnvObservableI.pm
inc/Installer/EUMMArgProviderI.pm
inc/Installer/Logger.pm
inc/Installer/MakeMaker.pm
inc/Installer/OptionsGetter.pm
inc/Installer/OptionsProviderI.pm
inc/Installer/OutPaths.pm
inc/Installer/Prerequisite.pm
inc/Installer/TargetHandler.pm
Makefile.PL
MANIFEST			This list of files
MANIFEST.skip
phylo/.project
phylo/bin/.cvsignore
phylo/bin/age2bl.pl
phylo/bin/bremer.pl
phylo/bin/dnd2svg.pl
phylo/bin/dndtag.pl
phylo/bin/droptip.pl
phylo/bin/LRmb.pl
phylo/bin/postmb.pl
phylo/Changes
phylo/Doxyfile
phylo/lib/Bio/ObjectCompat.pod
phylo/lib/Bio/Phylo.pm
phylo/lib/Bio/Phylo/Adaptor.pm
phylo/lib/Bio/Phylo/Adaptor/Bioperl/Datum.pm
phylo/lib/Bio/Phylo/Adaptor/Bioperl/Matrix.pm
phylo/lib/Bio/Phylo/Adaptor/Bioperl/Node.pm
phylo/lib/Bio/Phylo/Adaptor/Bioperl/Tree.pm
phylo/lib/Bio/Phylo/Forest.pm
phylo/lib/Bio/Phylo/Forest/Node.pm
phylo/lib/Bio/Phylo/Forest/Tree.pm
phylo/lib/Bio/Phylo/Generator.pm
phylo/lib/Bio/Phylo/IO.pm
phylo/lib/Bio/Phylo/Listable.pm
phylo/lib/Bio/Phylo/Manual.pod
phylo/lib/Bio/Phylo/Matrices.pm
phylo/lib/Bio/Phylo/Matrices/Datum.pm
phylo/lib/Bio/Phylo/Matrices/Matrix.pm
phylo/lib/Bio/Phylo/Matrices/TypeSafeData.pm
phylo/lib/Bio/Phylo/Matrices/Datatype.pm
phylo/lib/Bio/Phylo/Matrices/Datatype/Continuous.pm
phylo/lib/Bio/Phylo/Matrices/Datatype/Custom.pm
phylo/lib/Bio/Phylo/Matrices/Datatype/Dna.pm
phylo/lib/Bio/Phylo/Matrices/Datatype/Mixed.pm
phylo/lib/Bio/Phylo/Matrices/Datatype/Protein.pm
phylo/lib/Bio/Phylo/Matrices/Datatype/Restriction.pm
phylo/lib/Bio/Phylo/Matrices/Datatype/Rna.pm
phylo/lib/Bio/Phylo/Matrices/Datatype/Standard.pm
phylo/lib/Bio/Phylo/Mediators/TaxaMediator.pm
phylo/lib/Bio/Phylo/Parsers/Newick.pm
phylo/lib/Bio/Phylo/Parsers/Nexus.pm
phylo/lib/Bio/Phylo/Parsers/Table.pm
phylo/lib/Bio/Phylo/Parsers/Taxlist.pm
phylo/lib/Bio/Phylo/Taxa.pm
phylo/lib/Bio/Phylo/Taxa/Taxon.pm
phylo/lib/Bio/Phylo/Taxa/TaxaLinker.pm
phylo/lib/Bio/Phylo/Taxa/TaxonLinker.pm
phylo/lib/Bio/Phylo/Treedrawer.pm
phylo/lib/Bio/Phylo/Treedrawer/Svg.pm
phylo/lib/Bio/Phylo/Unparsers/Mrp.pm
phylo/lib/Bio/Phylo/Unparsers/Newick.pm
phylo/lib/Bio/Phylo/Unparsers/Nexus.pm
phylo/lib/Bio/Phylo/Unparsers/Pagel.pm
phylo/lib/Bio/Phylo/Util/CONSTANT.pm
phylo/lib/Bio/Phylo/Util/Exceptions.pm
phylo/lib/Bio/Phylo/Util/IDPool.pm
phylo/lib/Bio/Phylo/Util/XMLWritable.pm
phylo/lib/Bio/README
phylo/lib/Bio/Tools/Run/MrBayes.pm
phylo/Makefile.PL
phylo/Build.PL
phylo/MANIFEST			This list of files
phylo/MANIFEST.skip
phylo/META.yml
phylo/phylo.kpf
phylo/README
phylo/t/00-load.t
phylo/t/01-phylo.t
phylo/t/02-newick.t
phylo/t/03-node.t
phylo/t/04-generator.t
phylo/t/05-trees.t
phylo/t/06-tree.t
phylo/t/07-unparse.t
phylo/t/08-datum.t
phylo/t/09-matrix.t
phylo/t/10-matrices.t
phylo/t/11-taxon.t
phylo/t/12-taxa.t
phylo/t/13-listable.t
phylo/t/14-nexus.t
phylo/t/15-table.t
phylo/t/16-unparse.t
phylo/t/17-parse.t
phylo/t/18-taxlist.t
phylo/t/19-svg.t
phylo/t/pod-coverage.t
phylo/t/pod.t
phylo/t/regress_18208.t
phylo/t/regress_21209.t
phylo/t/regress_21417.t
phylo/t/regress_22813.t
phylo/META.yml
META.yml                                 Module meta-data (added by MakeMaker)
README.txt